PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_201610_mjwh.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 467aa    MW: 50980.9 Da    PI: 4.9723
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_201610_mjwh.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.3e-053563931254
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Bv8_201610_mjwh.t1 356 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 393
                         677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973344393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.82E-6354398No hitNo description
SuperFamilySSF474591.7E-11354406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.0E-9358401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MGEEFQGGVC GTWWNPPHSL FSGGVSSPCS VAQLGGGFDM GSFGWPNEVI KGSKFNNNNN  60
NNNNNPTFDN LIFPDQMDSS LDILGFGLSP TSSTTDWNHQ NLLCNTGNNE GNFDSILQDN  120
MNNTRLSSYG MEANSQNIMN SSNFTSQDAS PPMALTASSN SSGDSSTITS EGGLATSFPM  180
SSSASYLIQS LFDDCDEAQV LHEPQSAIPQ YQLITNPSNY GSLDTSCEII SSNAWVETSV  240
GNTHPSLPSQ QHILQSNKLN NGGMSALIHD HGQVFSGQYS PTTLNNIRAS LLNSLQSRSR  300
GPSFNQKSHS STSLPNKVNN EEPRRESKNN TSNNDQPQAK RPRIETPSPL PTFKVRKEKL  360
GDRITALQQL VSPFGKTDTA SVLHEAIEYI KFLHDQVHVL STPYLKGGNP MQQQDCDKLK  420
DNQEECKQEL RSRGLCLVPI SSTYPVAQET PVDFWTPTFG GTTTTFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010665766.10.0PREDICTED: transcription factor bHLH112
TrEMBLA0A0J8B6H70.0A0A0J8B6H7_BETVU; Uncharacterized protein
STRINGVIT_00s0274g00070.t011e-106(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.33e-49bHLH family protein